BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H06LP1|AL430618
(960 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1370 1255 0.0
3x_Contig1764 101 3e-21
>3x_Contig1370
Length = 5848
Score = 1255 bits (633), Expect = 0.0
Identities = 636/637 (99%)
Strand = Plus / Plus
Query: 1 cattattttttacctttgaatcgaaaacatccgtgtcattcgaataaaaaggcatatcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5208 cattattttttacctttgaatcgaaaacatccgtgtcattcgaataaaaaggcatatcgt 5267
Query: 61 gatcatttcgaaagaaatgacttcgacagttgtctaatatagttagtagaaaggtttgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5268 gatcatttcgaaagaaatgacttcgacagttgtctaatatagttagtagaaaggtttgac 5327
Query: 121 gatagtctcaatgtaaactaaagttcaaaccaatgctgaaaaaattaaatttcaataaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5328 gatagtctcaatgtaaactaaagttcaaaccaatgctgaaaaaattaaatttcaataaca 5387
Query: 181 taccaatacctctagcagcaacatcagttgctaccatgataggagatctaccggacctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5388 taccaatacctctagcagcaacatcagttgctaccatgataggagatctaccggacctaa 5447
Query: 241 actcagccaaaacccaatcacgctcgttctgagccttgtcaccgtgaatggccaaagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5448 actcagccaaaacccaatcacgctcgttctgagccttgtcaccgtgaatggccaaagctg 5507
Query: 301 gccagccttcagttctcaaataagaagtgatctcatcacaagttctcttagtggaagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5508 gccagccttcagttctcaaataagaagtgatctcatcacaagttctcttagtggaagcaa 5567
Query: 361 aaatgatgatcttggagtcttgatcttgagaagcggtttccaaatgcttggccaatctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5568 aaatgatgatcttggagtcttgatcttgagaagcggtttccaaatgcttggccaatctat 5627
Query: 421 ctctcttttcgaaatcagttaggacttcgacgatctgagtgattgtgtgggatgcagaca 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5628 ctctcttttcgaaatcagtaaggacttcgacgatctgagtgattgtgtgggatgcagaca 5687
Query: 481 attccaaagaaccaatttgaacttgaattggatcatgcaaatagtcacttgccaattgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5688 attccaaagaaccaatttgaacttgaattggatcatgcaaatagtcacttgccaattgtt 5747
Query: 541 taacttcctttggccaagtagcggaccacatcaaagtttgtctatcaggtctaatttgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5748 taacttcctttggccaagtagcggaccacatcaaagtttgtctatcaggtctaatttgat 5807
Query: 601 cgacaatttttctgatttgaggttcgaaacccatatc 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 5808 cgacaatttttctgatttgaggttcgaaacccatatc 5844
>3x_Contig1764
Length = 22510
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 603 acaatttttctgatttgaggttcgaaacccatatccaacattctatcagcttcatccaa 661
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14539 acaattctcctgatttgaggttcgaaacccatatccaacattctatcagcttcatccaa 14481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8282
Number of Sequences: 1807
Number of extensions: 8282
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 2
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)